Gene name

CDH16

Experiment(s)

For this entry:
For ortholog entries:
E2REV2_CANLF

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
Start End Localisation
1 757 Extracellular
758 780 Membrane
781 800 Cytoplasmic
Glycosylation
Position Site resource Glycan resource PubMed link(s)
489 ACGGD-BD WURCS=2.0/3,16,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,11,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2-2-2-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,14,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,15,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-2-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/2,10,0+/[axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-1-2-2-2-2-2/
489 ACGGD-BD WURCS=2.0/4,12,0+/[Aad21122h-2a_2-6_5*NCC/3=O][axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-3-3-3-3-3-4-4-4-4-4/
489 ACGGD-BD WURCS=2.0/4,13,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-2-2-2-2-2-2-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/3,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,12,0+/[Aad21122h-2a_2-6_5*NCCO/3=O][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,14,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-1-2-2-2-2-2-3-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/2,11,0+/[axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-1-2-2-2-2-2-2/
489 ACGGD-BD WURCS=2.0/3,10,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,14,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-2-2-2-2-2-3-3-3-3-3-4-4/
489 ACGGD-BD WURCS=2.0/3,11,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/2,9,0+/[axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-2-2-2-2-2/
489 ACGGD-BD WURCS=2.0/2,5,0+/[axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2/
489 ACGGD-BD WURCS=2.0/3,10,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-2-3-3-3/
489 ACGGD-BD WURCS=2.0/3,15,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,11,0+/[Aad21122h-2a_2-6_5*NCC/3=O][axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-3-3-3-3-4-4-4-4-4/
489 ACGGD-BD WURCS=2.0/4,11,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-2-2-2-2-2-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/3,11,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-2-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,11,0+/[axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-1-1-1-2-2-2-2-2-3/
489 ACGGD-BD WURCS=2.0/3,12,0+/[axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-1-1-1-2-2-2-2-2-2-3/
489 ACGGD-BD WURCS=2.0/3,8,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-3-3-3/
489 ACGGD-BD WURCS=2.0/3,15,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-2-2-2-2-2-3-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/3,9,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-3-3-3/
489 ACGGD-BD WURCS=2.0/4,14,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-2-2-2-2-2-3-3-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/4,15,0+/[Aad21122h-2a_2-6_5*NCC/3=O][axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-3-3-3-3-3-3-4-4-4-4-4-4-4/
489 ACGGD-BD WURCS=2.0/3,13,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,15,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-1-2-2-2-2-2-3-3-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/3,11,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,14,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-2-3-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,11,0+/[Aad21122h-2a_2-6_5*NCC/3=O][axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-3-3-3-3-3-4-4-4-4/
489 ACGGD-BD WURCS=2.0/3,16,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-2-2-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,13,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-2-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,16,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-2-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,9,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,15,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-1-2-2-2-2-2-3-3-3-3-3-4-4/
489 ACGGD-BD WURCS=2.0/4,14,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-1-2-2-2-2-2-2-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/3,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-2-3-3-3/
489 ACGGD-BD WURCS=2.0/4,13,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-2-2-2-2-2-3-3-3-3-3-4-4/
489 ACGGD-BD WURCS=2.0/3,11,0+/[Aad21122h-2a_2-6_5*NCCO/3=O][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,13,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,13,0+/[Aad21122h-2a_2-6_5*NCC/3=O][axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-3-3-3-3-3-4-4-4-4-4-4/
489 ACGGD-BD WURCS=2.0/3,14,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-2-2-2-2-2-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/4,17,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-1-2-2-2-2-2-2-3-3-3-3-3-3-4-4/
489 ACGGD-BD WURCS=2.0/3,17,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-2-2-3-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-2-2-2-2-3-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/3,11,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2-2-2-2-3-3-3/
489 ACGGD-BD WURCS=2.0/3,8,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,13,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-1-2-2-2-2-2-3-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/3,11,0+/[Aad21122h-2a_2-6_5*NCCO/3=O][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,14,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2-2-2-2-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,15,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,13,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/4,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5][axxxxA-1x_1-5]/1-2-2-2-2-2-2-3-3-3-3-4/
489 ACGGD-BD WURCS=2.0/3,16,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2-2-2-2-2-3-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/2,10,0+/[axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-2-2-2-2-2-2/
489 ACGGD-BD WURCS=2.0/3,10,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,16,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-2-2-3-3-3-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-2-2-2-2-2-2-3-3-3-3/
489 ACGGD-BD WURCS=2.0/3,12,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-2-2-2-2-3-3-3-3-3/
489 ACGGD-BD WURCS=2.0/2,13,0+/[axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-1-1-1-1-1-2-2-2-2-2-2-2/
489 ACGGD-BD WURCS=2.0/3,15,0+/[axxxxh-1x_1-5_?*][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-2-2-2-2-2-2-3-3-3-3-3-3-3/

Family and domain data

Database Domain/Family name
InterPro Cadherin-16
InterPro Cadherin-like_dom
InterPro Cadherin-like_sf
Pfam Cadherin

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