Gene name
NGFR (Tnfrsf16)
Experiment(s)
For this entry:
TNR16_RAT (NGFR)
| Species | Rattus norvegicus |
|---|---|
| Localization | Apical plasma membrane |
| Reference |
Yeaman C,Le Gall AH,Baldwin AN,Monlauzeur L,Le Bivic A,Rodriguez-Boulan E (1997) The O-glycosylated stalk domain is required for apical sorting of neurotrophin receptors in polarized MDCK cells., J Cell Biol, 139, 929-40. [PubMed] [DOI] |
| Evidence level | Antibody staining |
| Organ | Kidney |
| Cell | MDCK cells (distal tubule) |
| Notes |
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
| Start | End | Localisation |
|---|---|---|
| 1 | 29 | Signal peptide |
| 30 | 254 | Extracellular |
| 255 | 273 | Membrane |
| 274 | 425 | Cytoplasmic |
Phosphorylation
Glycosylation
Family and domain data
| Database | Domain/Family name |
|---|---|
| InterPro | DEATH-like_dom_sf |
| InterPro | Death_domain |
| InterPro | TNFR/NGFR_Cys_rich_reg |
| InterPro | TNFR16_TM |
| InterPro | TNFR_16 |
| InterPro | TNFRSF16_N |
| Pfam | Death |
| Pfam | TNFR_16_TM |
| Pfam | TNFR_c6 |