PolarProtDb

Gene name

Susd2

Experiment(s)

For this entry:

For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).

CCTOP topology prediction

Start	End	Localisation
1	22	Signal peptide
23	782	Extracellular
783	805	Membrane
806	820	Cytoplasmic

Glycosylation

Position	Site resource	PubMed link(s)
159	dbPTM	19349973
159	UniProtKB	19349973
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD
700	ACGGD-BD

Family and domain data

Database	Domain/Family name
InterPro	AMOP_dom
InterPro	Somatomedin_B-like_dom_sf
InterPro	Somatomedin_B_dom
InterPro	Sushi/SCR/CCP_sf
InterPro	Sushi_SCR_CCP_dom
InterPro	VWF_type-D
Pfam	AMOP
Pfam	Somatomedin_B
Pfam	Sushi
Pfam	VWD