PolarProtDb

Gene name

PCDH19 (KIAA1313)

Experiment(s)

For this entry:

For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).

CCTOP topology prediction

Start	End	Localisation
1	22	Signal peptide
23	678	Extracellular
679	701	Membrane
702	1148	Cytoplasmic

Phosphorylation

Position	Resource
27	23129656
37	36275821
782	50785920
830	38489424
907	50785924
912	25748887
1045	50785912
1063	4745058
1067	4745063
1097	465160
1126	50785916
1137	8111004

Glycosylation

Position	Site resource	PubMed link(s)
261	PDB	32101743
420	N-GlycoSiteAtlas	23090970
485	N-GlycoSiteAtlas
546	N-GlycoSiteAtlas	23090970
546	PolarProtDb	31844046
676	UniPep

Family and domain data

Database	Domain/Family name
InterPro	Cadherin-like_dom
InterPro	Cadherin-like_sf
InterPro	Cadherin_CS
InterPro	Cadherin_N
InterPro	Protocadherin-19
Pfam	Cadherin
Pfam	Cadherin_2