Gene name
ATRN (KIAA0548,Mgca,Mg)
Experiment(s)
For this entry:
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
Start | End | Localisation |
---|---|---|
1 | 1277 | Extracellular |
1278 | 1299 | Membrane |
1300 | 1428 | Cytoplasmic |
Eukaryotic Linear Motif (ELM)
Start | End | Sequence | Motif |
---|---|---|---|
1412 | 1416 | AVRNR | TRG_ER_diArg_1 |
Phosphorylation
Glycosylation
Position | Site resource | Glycan resource | PubMed link(s) |
---|---|---|---|
263 | Glyconnect | 30899004 | |
382 | Glyconnect | 30899004 | |
382 | Glyconnect | 30899004 | |
415 | Glyconnect | 30899004 | |
415 | Glyconnect | 30899004 | |
415 | Glyconnect | 30899004 | |
415 | Glyconnect | 30899004 | |
415 | Glyconnect | 30899004 | |
415 | Glyconnect | 30899004 | |
427 | Glyconnect | 30899004 | |
427 | Glyconnect | 30899004 | |
427 | Glyconnect | 30899004 | |
427 | Glyconnect | 30899004 | |
427 | Glyconnect | 30899004 | |
427 | Glyconnect | 30899004 | |
427 | Glyconnect | 30899004 | |
574 | Glyconnect | 30899004 | |
574 | Glyconnect | 30899004 | |
913 | Glyconnect | 30899004 | |
1042 | Glyconnect | 30899004 | |
1053 | Glyconnect | 30899004 |
Family and domain data
Database | Domain/Family name |
---|---|
InterPro | C-type_lectin-like |
InterPro | C-type_lectin-like/link_sf |
InterPro | CTDL_fold |
InterPro | CUB_dom |
InterPro | EGF-like_dom |
InterPro | Gal_Oxase/kelch_b-propeller |
InterPro | Kelch-typ_b-propeller |
InterPro | Kelch_1 |
InterPro | Laminin_EGF |
InterPro | Plexin_repeat |
InterPro | PSI |
InterPro | Sperma_CUB_dom_sf |
Pfam | CUB |
Pfam | Kelch_1 |
Pfam | Lectin_C |
Pfam | PSI |