Gene name
Trpm4 (Ltrpc4)
Experiment(s)
For this entry:
TRPM4_MOUSE (Trpm4)
| Species | Mus musculus |
|---|---|
| Localization | Apical plasma membrane |
| Reference |
Yu W,Hill WG,Apodaca G,Zeidel ML (2011) Expression and distribution of transient receptor potential (TRP) channels in bladder epithelium., Am J Physiol Renal Physiol, 300, F49-59. [PubMed] [DOI] |
| Evidence level | Antibody staining |
| Organ | Bladder |
| Cell | Urothelial cells |
| Notes |
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
| Start | End | Localisation |
|---|---|---|
| 1 | 689 | Cytoplasmic |
| 690 | 710 | Membrane |
| 711 | 771 | Extracellular |
| 772 | 797 | Membrane |
| 798 | 861 | Cytoplasmic |
| 862 | 881 | Membrane |
| 882 | 885 | Extracellular |
| 886 | 907 | Membrane |
| 908 | 925 | Cytoplasmic |
| 926 | 948 | Membrane |
| 949 | 1013 | Extracellular |
| 1014 | 1039 | Membrane |
| 1040 | 1069 | Cytoplasmic |
| 1070 | 1085 | Membrane |
| 1086 | 1213 | Extracellular |
Phosphorylation
Family and domain data
| Database | Domain/Family name |
|---|---|
| InterPro | Ion_trans_dom |
| InterPro | TRPM4 |
| InterPro | TRPM_SLOG |
| Pfam | Ion_trans |
| Pfam | LSDAT_euk |