PolarProtDb

Gene name

SLITRK4

Experiment(s)

For this entry:

For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).

CCTOP topology prediction

Start	End	Localisation
1	18	Signal peptide
19	619	Extracellular
620	643	Membrane
644	837	Cytoplasmic

Phosphorylation

Position	Resource
663	31885762
736	17552074
741	4749233
742	4749238
755	50831706
769	479126
811	15229003
824	36124796

Glycosylation

Position	Site resource	Glycan resource	PubMed link(s)
301	PhosphoSitePlus
301	dbPTM		55833113
301	O-GlycoProteomDB
306	PhosphoSitePlus
306	dbPTM		55833119
306	O-GlycoProteomDB
307	PhosphoSitePlus
307	dbPTM		55833125
307	O-GlycoProteomDB
334	UniCarbKB	$WURCS=2.0/2,2,1/[uxxxxh_2*NCC/3=O][uxxxxh]/1-2/a?\|b?}-{a?\|b?$	30459171
423	N-GlycoSiteAtlas		25902405
423	PolarProtDb		31844046
588	O-GlycoProteomDB

Family and domain data

Database	Domain/Family name
InterPro	Cys-rich_flank_reg_C
InterPro	Leu-rich_rpt
InterPro	Leu-rich_rpt_typical-subtyp
InterPro	LRR_dom_sf
InterPro	Slitrk
Pfam	LRR_8