PolarProtDb

Gene name

SEMA4B (Kiaa1745,Semac,SemC)

Experiment(s)

For this entry:

For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).

CCTOP topology prediction

Start	End	Localisation
1	43	Signal peptide
44	717	Extracellular
718	738	Membrane
739	837	Cytoplasmic

Phosphorylation

Position	Resource
4	23054274
70	23054277
71	23054280
699	195034525
769	10793385
779	8091665
780	8092294
787	462831
789	36129601
791	23220404
793	10360500
801	5200702
809	1244625
813	1211734
818	1211738
830	478679
835	6148774

Glycosylation

Position	Site resource	Glycan resource	PubMed link(s)
69	UniPep
69	UniProtKB		16335952
165	UniPep
410	UniPep
410	UniProtKB		16335952
582	UniCarbKB	$WURCS=2.0/2,2,1/[uxxxxh_2*NCC/3=O][uxxxxh]/1-2/a?\|b?}-{a?\|b?$	30459171
694	O-GlycoProteomDB

Family and domain data

Database	Domain/Family name
InterPro	Plexin_repeat
InterPro	PSI
InterPro	Semap_dom
InterPro	Semap_dom_sf
InterPro	Semaphorin
InterPro	WD40/YVTN_repeat-like_dom_sf
Pfam	PSI
Pfam	Sema