Gene name

PLXNB1 (KIAA0407,PLXN5,SEP)

Experiment(s)

For this entry:
For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
Start End Localisation
1 19 Signal peptide
20 1489 Extracellular
1490 1510 Membrane
1511 2135 Cytoplasmic
Eukaryotic Linear Motif (ELM)
Start End Sequence Motif
1895 1899 PPRPR TRG_ER_diArg_1
Phosphorylation
Glycosylation

Family and domain data

Database Domain/Family name
InterPro Ig-like_fold
InterPro Ig_E-set
InterPro IPT_dom
InterPro Plexin
InterPro Plexin_cytoplasmic_RasGAP_dom
InterPro Plexin_repeat
InterPro PSI
InterPro Rho_GTPase_activation_prot
InterPro Semap_dom
InterPro Semap_dom_sf
InterPro TIG1_plexin
InterPro TIG2_plexin
InterPro WD40/YVTN_repeat-like_dom_sf
Pfam Plexin_cytopl
Pfam PSI
Pfam Sema
Pfam TIG
Pfam TIG_2
Pfam TIG_plexin

Interactions

With (links to EBI) #Exp PubMed links
RON_HUMAN 3 15184888
MET_HUMAN 6 15184888
Protein can be found in apical membrane, Protein can be found in basal membrane, Protein can be found both membranes, Localisation is unknown.

By using PolarProtDb you accept the Privacy Notice in compliance with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018. Read the Privacy Notice