Gene name
PDPN (GP36)
Experiment(s)
For this entry:
PDPN_RAT (PDPN)
| Species | Rattus norvegicus |
|---|---|
| Localization | Apical plasma membrane |
| Reference |
Shirasawa M,Fujiwara N,Hirabayashi S,Ohno H,Iida J,Makita K,Hata Y (2004) Receptor for advanced glycation end-products is a marker of type I lung alveolar cells., Genes Cells, 9, 165-74. [PubMed] [DOI] |
| Evidence level | Antibody staining |
| Organ | Kidney |
| Cell | MDCK cells (distal tubule) |
| Notes |
PDPN_RAT (PDPN)
| Species | Rattus norvegicus |
|---|---|
| Localization | Apical plasma membrane |
| Reference |
Shirasawa M,Fujiwara N,Hirabayashi S,Ohno H,Iida J,Makita K,Hata Y (2004) Receptor for advanced glycation end-products is a marker of type I lung alveolar cells., Genes Cells, 9, 165-74. [PubMed] [DOI] |
| Evidence level | Antibody staining |
| Organ | Lung |
| Cell | Alveolar cells |
| Notes | Electron micrographs were used to clarify localization |
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
| Start | End | Localisation |
|---|---|---|
| 1 | 23 | Signal peptide |
| 24 | 131 | Extracellular |
| 132 | 156 | Membrane |
| 157 | 166 | Cytoplasmic |
Glycosylation
| Position | Site resource | Glycan resource | PubMed link(s) |
|---|---|---|---|
| 52 | UniProtKB |
Family and domain data
| Database | Domain/Family name |
|---|---|
| Pfam | Podoplanin |