Gene name
IGSF5 (Jam4)
Experiment(s)
For this entry:
IGSF5_RAT (IGSF5)
| Species | Rattus norvegicus |
|---|---|
| Localization | Apical plasma membrane |
| Reference |
Harita Y,Miyauchi N,Karasawa T,Suzuki K,Han GD,Koike H,Igarashi T,Shimizu F,Kawachi H (2006) Altered expression of junctional adhesion molecule 4 in injured podocytes., Am J Physiol Renal Physiol, 290, F335-44. [PubMed] [DOI] |
| Evidence level | Antibody staining |
| Organ | Kidney |
| Cell | Podocytes |
| Notes |
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
| Start | End | Localisation |
|---|---|---|
| 1 | 25 | Signal peptide |
| 26 | 238 | Extracellular |
| 239 | 265 | Membrane |
| 266 | 369 | Cytoplasmic |
Phosphorylation
| Position | Resource |
|---|---|
| 354 | 17545833 |
Family and domain data
| Database | Domain/Family name |
|---|---|
| InterPro | Ig-like_dom |
| InterPro | Ig-like_dom_sf |
| InterPro | Ig-like_fold |
| InterPro | Ig_I-set |
| InterPro | Ig_sub |
| InterPro | IgSF5 |
| Pfam | I-set |