PolarProtDb

Gene name

HAVCR1 (KIM1,TIM1,TIMD1)

Experiment(s)

For this entry:

For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).

CCTOP topology prediction

Start	End	Localisation
1	19	Signal peptide
20	295	Extracellular
296	316	Membrane
317	364	Cytoplasmic

Phosphorylation

Position	Resource
103	34359436
223	3246170
232	23112074
235	23112076
236	23112078
350	20842101

Glycosylation

Position	Site resource	Glycan resource	PubMed link(s)
65	N-GlycoSiteAtlas		25207853
65	PolarProtDb		31844046
164	dbPTM		7721869
205	UniCarbKB	$WURCS=2.0/2,2,1/[uxxxxh_2*NCC/3=O][uxxxxh]/1-2/a?\|b?}-{a?\|b?$	30459171

Family and domain data

Database	Domain/Family name
InterPro	Ig-like_dom
InterPro	Ig-like_dom_sf
InterPro	Ig-like_fold
InterPro	Ig/MHC_CS
InterPro	Ig_sub
InterPro	Ig_V-set
Pfam	V-set

Interactions

With (links to EBI)	#Exp	PubMed links
IGHA1_HUMAN	3	17229699
IGL1_HUMAN	3	17229699

Protein can be found in apical membrane, Protein can be found in basal membrane, Protein can be found both membranes, Localisation is unknown.