Gene name
CLCA4 (Clca6,Prp3,CaCC2)
Experiment(s)
For this entry:
F1S4D1_PIG (CLCA4)
| Species | Sus scrofa |
|---|---|
| Localization | Apical plasma membrane |
| Reference |
Plog S,Grötzsch T,Klymiuk N,Kobalz U,Gruber AD,Mundhenk L (2012) The porcine chloride channel calcium-activated family member pCLCA4a mirrors lung expression of the human hCLCA4., J Histochem Cytochem, 60, 45-56. [PubMed] [DOI] |
| Evidence level | Antibody staining |
| Organ | Lung |
| Cell | Airway epithel cells |
| Notes |
F1S4D1_PIG (CLCA4)
| Species | Sus scrofa |
|---|---|
| Localization | Apical plasma membrane |
| Reference |
Plog S,Grötzsch T,Klymiuk N,Kobalz U,Gruber AD,Mundhenk L (2012) The porcine chloride channel calcium-activated family member pCLCA4a mirrors lung expression of the human hCLCA4., J Histochem Cytochem, 60, 45-56. [PubMed] [DOI] |
| Evidence level | Antibody staining |
| Organ | Small intestine |
| Cell | Enterocytes |
| Notes | Not expressed in goblet cells |
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
| Start | End | Localisation |
|---|---|---|
| 1 | 21 | Signal peptide |
| 22 | 885 | Extracellular |
| 886 | 908 | Membrane |
| 909 | 921 | Cytoplasmic |
Family and domain data
| Database | Domain/Family name |
|---|---|
| InterPro | CLCA_chordata |
| InterPro | CLCA_N |
| InterPro | Ig-like_fold |
| InterPro | VWF_A |
| InterPro | vWFA_dom_sf |
| Pfam | CLCA |
| Pfam | VWA |