Gene name
Atp8a1
Experiment(s)
For this entry:
F1LUT4_RAT (Atp8a1)
| Species | Rattus norvegicus |
|---|---|
| Localization | Apical plasma membrane |
| Reference |
Chaubey PM,Hofstetter L,Roschitzki B,Stieger B (2016) Proteomic Analysis of the Rat Canalicular Membrane Reveals Expression of a Complex System of P4-ATPases in Liver., PLoS One, 11, e0158033. [PubMed] [DOI] |
| Evidence level | Antibody staining |
| Organ | Liver |
| Cell | Hepatocytes |
| Notes |
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
| Start | End | Localisation |
|---|---|---|
| 1 | 133 | Cytoplasmic |
| 134 | 154 | Membrane |
| 155 | 175 | Extracellular |
| 176 | 197 | Membrane |
| 198 | 679 | Cytoplasmic |
| 680 | 700 | Membrane |
| 701 | 711 | Extracellular |
| 712 | 732 | Membrane |
| 733 | 761 | Cytoplasmic |
| 762 | 782 | Membrane |
| 783 | 798 | Extracellular |
| 799 | 819 | Membrane |
| 820 | 828 | Cytoplasmic |
| 829 | 849 | Membrane |
| 850 | 869 | Extracellular |
| 870 | 890 | Membrane |
| 891 | 985 | Cytoplasmic |
Family and domain data
| Database | Domain/Family name |
|---|---|
| InterPro | ATPase_P-typ_cyto_dom_N |
| InterPro | ATPase_P-typ_P_site |
| InterPro | ATPase_P-typ_TM_dom_sf |
| InterPro | ATPase_P-typ_transduc_dom_A_sf |
| InterPro | HAD-like_sf |
| InterPro | HAD_sf |
| InterPro | P-type_ATPase_IV |
| InterPro | P_typ_ATPase |
| InterPro | P_typ_ATPase_c |
| Pfam | PhoLip_ATPase_C |