PolarProtDb

Gene name

SLC44A2 (CTL2)

Experiment(s)

For this entry:

For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).

CCTOP topology prediction

Start	End	Localisation
1	33	Cytoplasmic
34	55	Membrane
56	231	Extracellular
232	253	Membrane
254	255	Cytoplasmic
256	277	Membrane
278	314	Extracellular
315	336	Membrane
337	357	Cytoplasmic
358	379	Membrane
380	452	Extracellular
453	474	Membrane
475	498	Cytoplasmic
499	520	Membrane
521	598	Extracellular
599	620	Membrane
621	635	Cytoplasmic
636	657	Membrane
658	705	Extracellular

Glycosylation

Position	Site resource	Glycan resource	PubMed link(s)
416	UniCarbKB	$WURCS=2.0/2,7,6/[uxxxxh_2*NCC/3=O][uxxxxh]/1-1-2-2-2-2-2/a?\|b?\|c?\|d?\|e?\|f?\|g?}-{a?\|b?\|c?\|d?\|e?\|f?\|g?_a?\|b?\|c?\|d?\|e?\|f?\|g?}-{a?\|b?\|c?\|d?\|e?\|f?\|g?_a?\|b?\|c?\|d?\|e?\|f?\|g?}-{a?\|b?\|c?\|d?\|e?\|f?\|g?_a?\|b?\|c?\|d?\|e?\|f?\|g?}-{a?\|b?\|c?\|d?\|e?\|f?\|g?_a?\|b?\|c?\|d?\|e?\|f?\|g?}-{a?\|b?\|c?\|d?\|e?\|f?\|g?_a?\|b?\|c?\|d?\|e?\|f?\|g?}-{a?\|b?\|c?\|d?\|e?\|f?\|g?$	24090084
416	UniCarbKB		24090084

Family and domain data

Database	Domain/Family name
InterPro	Choline_transptr-like
Pfam	Choline_transpo