Gene name

COL4A1

Experiment(s)

For this entry:
CO4A1_MOUSE (COL4A1)
Species Mus musculus
Localization Basolateral plasma membrane
Reference Abrahamson DR,Hudson BG,Stroganova L,Borza DB,St John PL (2009) Cellular origins of type IV collagen networks in developing glomeruli., J Am Soc Nephrol, 20, 1471-9.
[PubMed] [DOI]
Evidence level Antibody staining
Organ Kidney
Cell Podocytes
Notes Forms a strict heterotrimer alpha1+alpha2+alpha1
CO4A1_MOUSE (COL4A1)
Species Mus musculus
Localization Basolateral plasma membrane
Reference Abrahamson DR,Hudson BG,Stroganova L,Borza DB,St John PL (2009) Cellular origins of type IV collagen networks in developing glomeruli., J Am Soc Nephrol, 20, 1471-9.
[PubMed] [DOI]
Evidence level Antibody staining
Organ Kidney
Cell Proximal tubules
Notes
For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
Start End Localisation
1 1669 Extracellular
Phosphorylation
Position Resource
656 54247298
1110 40510020
1352 476805
1433 54247295
1439 63298402

Family and domain data

Database Domain/Family name
InterPro Collagen
InterPro Collagen_IV_NC
InterPro Collagen_IV_NC_sf
InterPro CTDL_fold
Pfam C4
Pfam Collagen

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