Gene name

Col4a5

Experiment(s)

For this entry:
Q63ZW6_MOUSE (Col4a5)
Species Mus musculus
Localization Basolateral plasma membrane
Reference Abrahamson DR,Hudson BG,Stroganova L,Borza DB,St John PL (2009) Cellular origins of type IV collagen networks in developing glomeruli., J Am Soc Nephrol, 20, 1471-9.
[PubMed] [DOI]
Evidence level Antibody staining
Organ Kidney
Cell Podocytes
Notes Forms a strict heterotrimer alpha3+alpha4+alpha5
For ortholog entries:

Alignment and sequence features

Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
Start End Localisation
1 1691 Extracellular

Family and domain data

Database Domain/Family name
InterPro Collagen
InterPro Collagen_IV_NC
InterPro Collagen_IV_NC_sf
InterPro CTDL_fold
Pfam C4
Pfam Collagen

By using PolarProtDb you accept the Privacy Notice in compliance with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018. Read the Privacy Notice