Gene name
Ephb4 (HTK,MYK1,TYRO11,LOC686310)
Experiment(s)
For this entry:
A0A5F4D9M8_CANLF (Ephb4)
| Species | Canis lupus familiaris |
|---|---|
| Localization | Basolateral plasma membrane |
| Reference |
Caceres PS,Gravotta D,Zager PJ,Dephoure N,Rodriguez-Boulan E (2019) Quantitative proteomics of MDCK cells identify unrecognized roles of clathrin adaptor AP-1 in polarized distribution of surface proteins., Proc Natl Acad Sci U S A, 116, 11796-11805. [PubMed] [DOI] |
| Evidence level | Large-scale proteomics |
| Organ | Kidney |
| Cell | MDCK cells (distal tubule) |
| Notes |
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
| Start | End | Localisation |
|---|---|---|
| 1 | 15 | Signal peptide |
| 16 | 546 | Extracellular |
| 547 | 562 | Membrane |
| 563 | 987 | Cytoplasmic |
Family and domain data
| Database | Domain/Family name |
|---|---|
| InterPro | EPH-B4_SAM |
| InterPro | Eph_TM |
| InterPro | EphB4_rcpt_lig-bd |
| InterPro | Ephrin_rcpt_lig-bd_dom |
| InterPro | FN3_dom |
| InterPro | FN3_sf |
| InterPro | Galactose-bd-like_sf |
| InterPro | Growth_fac_rcpt_cys_sf |
| InterPro | Ig-like_fold |
| InterPro | Kinase-like_dom_sf |
| InterPro | Prot_kinase_dom |
| InterPro | Protein_kinase_ATP_BS |
| InterPro | SAM |
| InterPro | SAM/pointed_sf |
| InterPro | Ser-Thr/Tyr_kinase_cat_dom |
| InterPro | Tyr-kin_ephrin_A/B_rcpt-like |
| InterPro | Tyr_kinase_AS |
| InterPro | Tyr_kinase_cat_dom |
| InterPro | Tyr_kinase_ephrin_rcpt |
| InterPro | Tyr_kinase_rcpt_V_CS |
| Pfam | EphA2_TM |
| Pfam | Ephrin_lbd |
| Pfam | Ephrin_rec_like |
| Pfam | fn3 |
| Pfam | PK_Tyr_Ser-Thr |
| Pfam | SAM_1 |