Gene name
ITGA6
Experiment(s)
For this entry:
A0A5F4CJ46_CANLF (ITGA6)
| Species | Canis lupus familiaris |
|---|---|
| Localization | Basolateral plasma membrane |
| Reference |
Caceres PS,Gravotta D,Zager PJ,Dephoure N,Rodriguez-Boulan E (2019) Quantitative proteomics of MDCK cells identify unrecognized roles of clathrin adaptor AP-1 in polarized distribution of surface proteins., Proc Natl Acad Sci U S A, 116, 11796-11805. [PubMed] [DOI] |
| Evidence level | Large-scale proteomics |
| Organ | Kidney |
| Cell | MDCK cells (distal tubule) |
| Notes |
For ortholog entries:
Alignment and sequence features
Wheel: zoom in/out; drag: scroll left/right. Sequences and features are drawn in three lines. Bottom line: topology (red bar: cytoplasmic region; yellow bar: transmembrane region; transmembrane re-entrant loop; blue bar: extracellular region; black bar: signal peptide). Middle line: amino acid sequence (grey bar or one letter code). Top line: post translational modifications (Y: N-glycosylation site; Y: O-glycosylation site;P: phosphorylation site), intrinsically disordered regions (light green bar: IDR) and short linear motifs (light steel blue bar: ELM region).
CCTOP topology prediction
| Start | End | Localisation |
|---|---|---|
| 1 | 23 | Signal peptide |
| 24 | 1055 | Extracellular |
| 1056 | 1075 | Membrane |
| 1076 | 1130 | Cytoplasmic |
Family and domain data
| Database | Domain/Family name |
|---|---|
| InterPro | FG-GAP |
| InterPro | Int_alpha_beta-p |
| InterPro | Integrin_alpha |
| InterPro | Integrin_alpha-2 |
| InterPro | Integrin_alpha_C_CS |
| InterPro | Integrin_alpha_N |
| InterPro | Integrin_dom_sf |
| Pfam | FG-GAP |
| Pfam | Integrin_alpha2 |
| Pfam | VCBS |